Publications of Bram van Ginneken

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2021

Papers in international journals

  1. C. Jacobs, A. Setio, E. Scholten, P. Gerke, H. Bhattacharya, F. M. Hoesein, M. Brink, E. Ranschaert, P. de Jong, M. Silva, B. Geurts, K. Chung, S. Schalekamp, J. Meersschaert, A. Devaraj, P. Pinsky, S. Lam, B. van Ginneken and K. Farahani, "Deep Learning for Lung Cancer Detection in Screening CT Scans: Results of a Large-Scale Public Competition and an Observer Study with 11 Radiologists", Radiology: Artificial Intelligence, 2021;3(6):e210027.
    Abstract DOI PMID Download Cited by ~26
  2. N. Harlianto, N. Oosterhof, W. Foppen, M. Hol, R. Wittenberg, P. van der Veen, B. van Ginneken, F. Mohamed Hoesein, J. Verlaan, P. de Jong, J. Westerink, R. van Petersen, B. van Dinther, F. Asselbergs, H. Nathoe, G. de Borst, M. Bots, M. Geerlings, M. Emmelot, P. de Jong, T. Leiner, A. Lely, N. van der Kaaij, L. Kappelle, Y. Ruigrok, M. Verhaar, F. Visseren, J. Westerink and F. the UCC-SMART-Studygroup, "Diffuse idiopathic skeletal hyperostosis is associated with incident stroke in patients with increased cardiovascular risk", Rheumatology, 2021;61:2867-2874.
    Abstract DOI PMID Cited by ~2
  3. C. Jacobs, A. Schreuder, S. van Riel, E. Scholten, R. Wittenberg, M. Winkler Wille, B. de Hoop, R. Sprengers, O. Mets, B. Geurts, M. Prokop, C. Schaefer-Prokop and B. van Ginneken, "Assisted versus Manual Interpretation of Low-Dose CT Scans for Lung Cancer Screening: Impact on Lung-RADS Agreement", Radiology: Imaging Cancer, 2021;3(5):e200160.
    Abstract DOI PMID Cited by ~9
  4. N. Harlianto, J. Westerink, W. Foppen, M. Hol, R. Wittenberg, P. van der Veen, B. van Ginneken, J. Kuperus, J. Verlaan, P. de Jong, F. Mohamed Hoesein and O. behalf of the Group, "Visceral Adipose Tissue and Different Measures of Adiposity in Different Severities of Diffuse Idiopathic Skeletal Hyperostosis", Journal of Personalized Medicine, 2021;11:663.
    Abstract DOI PMID Cited by ~13
  5. G. Bortsova, C. González-Gonzalo, S. Wetstein, F. Dubost, I. Katramados, L. Hogeweg, B. Liefers, B. van Ginneken, J. Pluim, M. Veta, C. Sánchez and M. de Bruijne, "Adversarial Attack Vulnerability of Medical Image Analysis Systems: Unexplored Factors", Medical Image Analysis, 2021:102141.
    Abstract DOI PMID arXiv Download Cited by ~28
  6. E. Calli, E. Sogancioglu, B. van Ginneken, K. van Leeuwen and K. Murphy, "Deep learning for chest X-ray analysis: A survey", Medical Image Analysis, 2021;72:102125.
    Abstract DOI PMID Download Cited by ~211
  7. A. Schreuder, E. Scholten, B. van Ginneken and C. Jacobs, "Artificial intelligence for detection and characterization of pulmonary nodules in lung cancer CT screening: ready for practice?", Translational Lung Cancer Research, 2021;10(5):2378-2388.
    Abstract DOI PMID Cited by ~31
  8. K. Venkadesh, A. Setio, A. Schreuder, E. Scholten, K. Chung, M. W Wille, Z. Saghir, B. van Ginneken, M. Prokop and C. Jacobs, "Deep Learning for Malignancy Risk Estimation of Pulmonary Nodules Detected at Low-Dose Screening CT.", Radiology, 2021;300(2):438-447.
    Abstract DOI PMID Algorithm Cited by ~64
  9. K. van Leeuwen, S. Schalekamp, M. Rutten, B. van Ginneken and M. de Rooij, "Artificial intelligence in radiology: 100 commercially available products and their scientific evidence", European Radiology, 2021;31:3797-3804.
    Abstract DOI PMID Cited by ~172
  10. M. Caballo, A. Hernandez, S. Lyu, J. Teuwen, R. Mann, B. van Ginneken, J. Boone and I. Sechopoulos, "Computer-aided diagnosis of masses in breast computed tomography imaging: deep learning model with combined handcrafted and convolutional radiomic features", Journal of Medical Imaging, 2021;8.
    Abstract DOI PMID Cited by ~5
  11. A. Schreuder, C. Jacobs, N. Lessmann, M. Broeders, M. Silva, I. Isgum, P. de Jong, N. Sverzellati, M. Prokop, U. Pastorino, C. Schaefer-Prokop and B. van Ginneken, "Combining pulmonary and cardiac computed tomography biomarkers for disease-specific risk modelling in lung cancer screening", European Respiratory Journal, 2021;58(3):2003386.
    Abstract DOI PMID Cited by ~6
  12. N. Lessmann, C. Sánchez, L. Beenen, L. Boulogne, M. Brink, E. Calli, J. Charbonnier, T. Dofferhoff, W. van Everdingen, P. Gerke, B. Geurts, H. Gietema, M. Groeneveld, L. van Harten, N. Hendrix, W. Hendrix, H. Huisman, I. Isgum, C. Jacobs, R. Kluge, M. Kok, J. Krdzalic, B. Lassen-Schmidt, K. van Leeuwen, J. Meakin, M. Overkamp, T. van Rees Vellinga, E. van Rikxoort, R. Samperna, C. Schaefer-Prokop, S. Schalekamp, E. Scholten, C. Sital, L. Stöger, J. Teuwen, K. Vaidhya Venkadesh, C. de Vente, M. Vermaat, W. Xie, B. de Wilde, M. Prokop and B. van Ginneken, "Automated Assessment of COVID-19 Reporting and Data System and Chest CT Severity Scores in Patients Suspected of Having COVID-19 Using Artificial Intelligence", Radiology, 2021;298(1):E18-E28.
    Abstract DOI PMID Algorithm Download Cited by ~112
  13. E. Calli, K. Murphy, S. Kurstjens, T. Samson, R. Herpers, H. Smits, M. Rutten and B. van Ginneken, "Deep learning with robustness to missing data: A novel approach to the detection of COVID-19", PLoS One, 2021;16(7):e0255301.
    Abstract DOI Download Cited by ~3
  14. N. Hendrix, E. Scholten, B. Vernhout, S. Bruijnen, B. Maresch, M. de Jong, S. Diepstraten, S. Bollen, S. Schalekamp, M. de Rooij, A. Scholtens, W. Hendrix, T. Samson, L. Sharon Ong, E. Postma, B. van Ginneken and M. Rutten, "Development and Validation of a Convolutional Neural Network for Automated Detection of Scaphoid Fractures on Conventional Radiographs", Radiology: Artificial Intelligence, 2021:e200260.
    Abstract DOI Algorithm Download Cited by ~19
  15. K. van Leeuwen, F. Meijer, S. Schalekamp, M. Rutten, E. van Dijk, B. van Ginneken, T. Govers and M. Rooij, "Cost - effectiveness of artificial intelligence aided vessel occlusion detection in acute stroke: an early health technology assessment", Insights into Imaging, 2021;12:133.
    Abstract DOI Cited by ~18
  16. A. Hering, S. Hager, J. Moltz, N. Lessmann, S. Heldmann and B. van Ginneken, "CNN-based Lung CT Registration with Multiple Anatomical Constraints", Medical Image Analysis, 2021;72:102139.
    Abstract DOI Algorithm Download Cited by ~41

Preprints

  1. A. Reinke, M. Eisenmann, M. Tizabi, C. Sudre, T. Radsch, M. Antonelli, T. Arbel, S. Bakas, M. Cardoso, V. Cheplygina, K. Farahani, B. Glocker, D. Heckmann-Notzel, F. Isensee, P. Jannin, C. Kahn, J. Kleesiek, T. Kurc, M. Kozubek, B. Landman, G. Litjens, K. Maier-Hein, B. Menze, H. Muller, J. Petersen, M. Reyes, N. Rieke, B. Stieltjes, R. Summers, S. Tsaftaris, B. van Ginneken, A. Kopp-Schneider, P. Jager and L. Maier-Hein, "Common Limitations of Image Processing Metrics: A Picture Story", arXiv preprint arXiv:2104.05642, 2021.
    Abstract DOI arXiv Cited by ~103
  2. M. Antonelli, A. Reinke, S. Bakas, K. Farahani, AnnetteKopp-Schneider, B. Landman, G. Litjens, B. Menze, O. Ronneberger, R. Summers, B. van Ginneken, M. Bilello, P. Bilic, P. Christ, R. Do, M. Gollub, S. Heckers, H. Huisman, W. Jarnagin, M. McHugo, S. Napel, J. Pernicka, K. Rhode, C. Tobon-Gomez, E. Vorontsov, H. Huisman, J. Meakin, S. Ourselin, M. Wiesenfarth, P. Arbelaez, B. Bae, S. Chen, L. Daza, J. Feng, B. He, F. Isensee, Y. Ji, F. Jia, N. Kim, I. Kim, D. Merhof, A. Pai, B. Park, M. Perslev, R. Rezaiifar, O. Rippel, I. Sarasua, W. Shen, J. Son, C. Wachinger, L. Wang, Y. Wang, Y. Xia, D. Xu, Z. Xu, Y. Zheng, A. Simpson, L. Maier-Hein and M. Cardoso, "The Medical Segmentation Decathlon", arXiv preprint arXiv:2106.05735, 2021.
    Abstract arXiv Cited by ~489
  3. W. Xie, C. Jacobs and B. van Ginneken, "Dense regression activation maps for lesion segmentation in CT scans of COVID-19 patients", arXiv:2105.11748, 2021.
    Abstract arXiv
  4. A. Hering, L. Hansen, T. Mok, A. Chung, H. Siebert, S. Hager, A. Lange, S. Kuckertz, S. Heldmann, W. Shao, S. Vesal, M. Rusu, G. Sonn, T. Estienne, M. Vakalopoulou, L. Han, Y. Huang, P. Yap, M. Brudfors, Y. Balbastre, S. Joutard, M. Modat, G. Lifshitz, D. Raviv, J. Lv, Q. Li, V. Jaouen, D. Visvikis, C. Fourcade, M. Rubeaux, W. Pan, Z. Xu, B. Jian, F. Benetti, M. Wodzinski, N. Gunnarsson, J. Sjolund, D. Grzech, H. Qiu, Z. Li, A. Thorley, J. Duan, C. Grossbrohmer, A. Hoopes, I. Reinertsen, Y. Xiao, B. Landman, Y. Huo, K. Murphy, N. Lessmann, B. van Ginneken, A. Dalca and M. Heinrich, "Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning", arXiv preprint arXiv:2112.04489, 2021.
    Abstract arXiv Cited by ~86

Papers in conference proceedings

  1. W. Xie, C. Jacobs and B. van Ginneken, "Deep Clustering Activation Maps for Emphysema Subtyping", Medical Imaging with Deep Learning, 2021.
    Abstract Url
  2. A. Reinke, M. Eisenmann, M. Tizabi, C. Sudre, T. Radsch, M. Antonelli, T. Arbel, S. Bakas, J. Cardoso, V. Cheplygina, K. Farahani, B. Glocker, D. Heckmann-Notzel, F. Isensee, P. Jannin, C. Kahn, J. Kleesiek, T. Kurc, M. Kozubek, B. Landman, G. Litjens, K. Maier-Hein, A. Martel, H. Muller, J. Petersen, M. Reyes, N. Rieke, B. Stieltjes, R. Summers, S. Tsaftaris, B. van Ginneken, A. Kopp-Schneider, P. Jager and L. Maier-Hein, "Common limitations of performance metrics in biomedical image analysis", Medical Imaging with Deep Learning, 2021.
    Abstract DOI Cited by ~3

Abstracts

  1. W. Hendrix, N. Hendrix, M. Prokop, E. Scholten, B. Van Ginneken, M. Rutten and C. Jacobs, "Trends in the Incidence of Pulmonary Nodules in Chest Computed Tomography: 10-Year Results from Two Dutch Hospitals", European Congress of Radiology, 2021.
    Abstract DOI
  2. K. Venkadesh, A. Schreuder, E. Scholten, S. Atkar-Khattra, J. Mayo, Z. Saghir, M. Wille, B. van Ginneken, S. Lam, M. Prokop and C. Jacobs, "Integration Of A Deep Learning Algorithm Into The Clinically Established PanCan Model For Malignancy Risk Estimation Of Screen-detected Pulmonary Nodules In First Screening CT", Annual Meeting of the Radiological Society of North America, 2021.
    Abstract
  3. K. van Leeuwen, M. Rutten, S. Schalekamp, M. de Rooij and B. van Ginneken, "Clinical use of artificial intelligence in radiology departments in the Netherlands: a survey", European Congress of Radiology, 2021.
    Abstract
  4. K. van Leeuwen, M. de Rooij, M. Rutten, S. Schalekamp and B. van Ginneken, "Commercial Artificial Intelligence Solutions For Radiology: A Market Update", Annual Meeting of the Radiological Society of North America, 2021.
    Abstract
  5. K. van Leeuwen, M. de Rooij, M. Rutten, B. van Ginneken and S. Schalekamp, "Performance Of A Commercial Software Package For Lung Nodule Detection On Chest Radiographs Compared With 8 Expert Readers", Annual Meeting of the Radiological Society of North America, 2021.
    Abstract
  6. K. van Leeuwen, F. Meijer, S. Schalekamp, M. Rutten, E. van Dijk, B. van Ginneken, T. Govers and M. de Rooij, "Artificial Intelligence in Acute Stroke: an Early Health Technology Assessment of Vessel Occlusion Detection on Computed Tomography", European Congress of Radiology, 2021.
    Abstract

PhD theses

  1. A. Schreuder, "Lung cancer screening: use the scan to decide who to scan when", PhD thesis, 2021.
    Abstract Url