Publications of Alessa Hering

2025

Papers in international journals

1. J.S. Bosma, L. Builtjes, A. Saha, J. Twilt, M. Tsiknakis, K. Marias, D. Regge, N. Papanikolaou, I. Schoots, J. Veltman, M. Elschot, D. Yakar, N. Obuchowski, M. Heinrich, A. Hering, M. de Rooij and H. Huisman, "Scalable Clinical Annotation with Location Evidence (SCALE)", Computers in Biology and Medicine, 2025;199:111321.
   DOI PMID
2. L. Builtjes, J. Bosma, M. Prokop, B. van Ginneken and A. Hering, "Leveraging open-source large language models for clinical information extraction in resource-constrained settings", JAMIA Open, 2025;8.
   Abstract DOI PMID
3. L. Stam, S. Linden, R. Aquarius, A. Hering, L. Oostveen, F. Meijer and H. Boogaarts, "In-vivo cerebral artery pulsation assessment with Dynamic computed tomography angiography", European Journal of Radiology, 2025;182:111828.
   DOI PMID
4. H. Häntze, L. Xu, M. Rattunde, L. Donle, F. Dorfner, A. Hering, J. Nawabi, L. Adams and K. Bressem, "MRI annotation using an inversion-based preprocessing for CT model adaptation", European Radiology Experimental, 2025;9.
   Abstract DOI PMID
5. J.S. Bosma, K. Dercksen, L. Builtjes, R. André, C. Roest, S. Fransen, C. Noordman, M. Navarro-Padilla, J. Lefkes, N. Alves, M. de Grauw, L. van Eekelen, J. Spronck, M. Schuurmans, B. de Wilde, W. Hendrix, W. Aswolinskiy, A. Saha, J. Twilt, D. Geijs, J. Veltman, D. Yakar, M. de Rooij, F. Ciompi, A. Hering, J. Geerdink, H. Huisman, O. behalf of the consortium, M. de Grauw, L. van Eekelen, B. de Wilde, Q. van Lohuizen, M. Stegeman, K. Rutten, I. Smit, G. Stultiens, C. Overduin, M. Rutten, E. Scholten, R. van der Post, K. Grünberg, S. Vos, E. Taken, I. Nagtegaal, A. Mickan, M. Groeneveld, P. Gerke, J. Meakin, M. Looijen-Salamon, T. de Haas, F. Hoitsma, M. D'Amato and M. de Rooij, "The DRAGON benchmark for clinical NLP", npj Digital Medicine, 2025;8.
   Abstract DOI PMID
6. S. Gaur, M. Vitale, A. Hering, J. Kwisthout, C. Jacobs, L. Philipp and F. van der Graaf, "Fairness Evaluation of Risk Estimation Models for Lung Cancer Screening", Machine Learning for Biomedical Imaging, 2025;3:559-580.
   Abstract DOI

Preprints

1. J. Chen, S. Wei, J. Honkamaa, P. Marttinen, H. Zhang, M. Liu, Y. Zhou, Z. Tan, Z. Wang, Y. Wang, H. Zhou, S. Hu, Y. Zhang, Q. Tao, L. Förner, T. Wendler, B. Jian, B. Wiestler, T. Hable, J. Kim, D. Ruan, F. Madesta, T. Sentker, W. Heyer, L. Zuo, Y. Dai, J. Wu, J. Prince, H. Bai, Y. Du, Y. Liu, A. Hering, R. Dorent, L. Hansen, M. Heinrich and A. Carass, "Beyond the LUMIR challenge: The pathway to foundational registration models", arXiv:2505.24160, 2025.
   Abstract DOI arXiv
2. X. Pham, G. Vuurberg, M. Doppen, J. Roosen, T. Stille, T. Ha, T. Quach, Q. Dang, M. Luu, E. Smit, H. Mai, M. Heinrich, B. van Ginneken, M. Prokop and A. Hering, "TotalRegistrator: Towards a Lightweight Foundation Model for CT Image Registration", arXiv:2508.04450, 2025.
   Abstract DOI arXiv
3. N. Rocholl, E. Smit, M. Prokop and A. Hering, "Unstable Prompts, Unreliable Segmentations: A Challenge for Longitudinal Lesion Analysis", arXiv:2507.19230, 2025.
   Abstract DOI arXiv
4. S. de Boer, H. Häntze, K. Venkadesh, M. Buser, G. Mamani, L. Xu, L. Adams, J. Nawabi, K. Bressem, B. van Ginneken, M. Prokop and A. Hering, "Robust Kidney Abnormality Segmentation: A Validation Study of an AI-Based Framework", arXiv:2505.07573, 2025.
   Abstract DOI arXiv
5. W. Heyer, Y. Elser, L. Berkel, X. Song, X. Xu, P. Yan, X. Jia, J. Duan, Z. Li, T. Mok, B. LI, C. Staackmann, C. Gro\ssbr öhmer, L. Hansen, A. Hering, M. Sieren and M. Heinrich, "OncoReg: Medical Image Registration for Oncological Challenges", arXiv:2503.23179, 2025.
   Abstract DOI arXiv
6. L. Hansen, W. Heyer, C. Gro\ssbr öhmer, F. Madesta, T. Sentker, W. Jiazheng, Y. Zhang, H. Zhang, M. Liu, J. Wang, X. Zhu, Y. Li, L. Wang, D. Morozov, N. Haouchine, J. Honkamaa, P. Marttinen, Y. Zhou, Z. Tan, Z. Wang, Y. Wang, H. Zhou, S. Hu, Y. Zhang, Q. Tao, L. Förner, T. Wendler, B. Jian, C. Wachinger, J. Kim, D. Ruan, M. Wodzinski, H. Müller, T. Mok, X. Jia, J. Duan, M. Brudfors, S. Ahmadi, Y. Zhu, W. Hsu, T. Kapur, W. Wells, A. Golby, A. Carass, H. Bai, Y. Liu, P. Paul-Gilloteaux, J. Lindblad, N. Sladoje, A. Walter, J. Chen, R. Dorent, A. Hering and M. Heinrich, "Learn2Reg 2024: New Benchmark Datasets Driving Progress on New Challenges", arXiv:2509.01217, 2025.
   Abstract DOI arXiv

Papers in conference proceedings

1. A. Billis, A. Hering, L. Jiang, C. Meyer, L. Adams, R. Cuocolo, A. Löser, J. Nawabi and K. Bressem, "Computational Models for Patient Stratification in Urologic Cancers - Creating Robust and Trustworthy Multimodal AI for Health Care", 2025 IEEE 38th International Symposium on Computer-Based Medical Systems (CBMS), 2025:121-122.
   DOI
2. A. Jiménez-Sánchez, N. Avlona, S. de Boer, V. Campello, A. Feragen, E. Ferrante, M. Ganz, J. Gichoya, C. González, S. Groefsema, A. Hering, A. Hulman, L. Joskowicz, D. Juodelyte, M. Kandemir, T. Kooi, J. Lérida, L. Li, A. Pacheco, T. Rädsch, M. Reyes, T. Sourget, B. van Ginneken, D. Wen, N. Weng, J. Xu, H. Zając, M. Zuluaga and V. Cheplygina, "In the Picture: Medical Imaging Datasets, Artifacts, and their Living Review", Proceedings of the 2025 ACM Conference on Fairness, Accountability, and Transparency, 2025.
   Abstract DOI
3. X. Pham, M. Prokop, B. van Ginneken and A. Hering, "Divide to conquer: a field decomposition approach for multi-organ whole-body CT image registration", Medical Imaging 2025: Image Processing, 2025:48.
   DOI

Other publications

1. H. Häntze, M. Buser, A. Hering, L. Adams and K. Bressem, "Sex-Based Bias Inherent in the Dice Similarity Coefficient: A Model Independent Analysis for Multiple Anatomical Structures", Lecture Notes in Computer Science, 2025:125-134.
   DOI PMID